PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100229580121
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family AP2
Protein Properties Length: 348aa    MW: 38414.9 Da    PI: 8.6781
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100229580121genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.7e-17110159155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Ote100229580121|100229580121 110 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 159
                                   78*******************......55************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.7E-9110159IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-15110169IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-17111168IPR001471AP2/ERF domain
PROSITE profilePS5103217.28111167IPR001471AP2/ERF domain
SMARTSM003803.7E-31111173IPR001471AP2/ERF domain
CDDcd000183.69E-12111169No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MPIPLSXXXX XXXXXXFDLN LTLDSSDGHK LDANNCDGWS REASPANGGV ESSSSNDDAC  60
SRRAAASALN FDRGEPAAFS SPRVAVQQEV QQVQVVQARK SRRGPRSRSS QYRGVTFYRR  120
TGRWESHIWD CGKQVYLGGF DTALAAARAY DRAAIKFRGV EADINFNHSD YDDMKPMMNL  180
SKEEFVQALR KQSNVFSRGS CKYRAQNPGI KAYDKGAIMC NGETTLEPRY DKSQHDLNLN  240
LGMPASARSP KESGWLDSLK LHLGSSASNG GVPVRSRHPS LNPQFVPNNE ERETSASQLE  300
VGNLGERVHG HYQTAANSTA ASSRFSSEET ARNTLASYPW INPYLPPS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089376.16e-65PREDICTED: ethylene-responsive transcription factor RAP2-7-like
TrEMBLA0A0D2QCY82e-60A0A0D2QCY8_G
STRINGPOPTR_0008s04490.15e-53(Populus trichocarpa)